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Perplexed in Peoria
Posted: Fri Mar 07, 2008 8:18 pm
Guest
"Tim Tyler" <seemysig@cyberspace.org> wrote in message news:fqpb7m$u4o$1@darwin.ediacara.org...
Quote:
Tom Hendricks wrote:

Life is that reaction to the sun heat
cycle (you call it hydrological) that is the most stable.

The sun is the energy source for most life on earth,
directly or indirectly.

The other main possibility for an energy source is
geothermal energy - mosly resudual energy from the
earth's formation - which fuels most of the rest
of life on earth via subterranean vents.

Some OOL enthusiasts do think geothermal energy was
important at the origin - but IMO, the idea doesn't
fit in terribly well with the other clues we have.

No one (except maybe Antonie Muller) thinks that it is
the 'thermal' part of geothermal that supplies the energy.
Instead the hypothesis is the proximate cause of the
energy is chemical deviations from equilibrium. Of course,
the ultimate cause of these deviations (and the source of the
continuing replenishment of the deviations) is geothermal,
but the causation is very indirect.

Quote:
As to why we have life - and not, say only wind
and rain, dissipating energy gradients on earth,
IMO, that has to do with how benign the environment is:

If life can arise and persist at all, it tends to
spread into every nook and cranny, eventually feeding
off every energy gradient it can find - putting up
hydro-electric dams to catch the rain and turbines to
catch the wind - and so on. If not, we have a
situation like the one on Venus: just wind and rain.

In the Wachtershauser theory, the analogy of the
hydro-electric dam is particularly appropriate. W_
thinks that the relevant chemical potentials might well
dissipate on their own if life didn't get involved in
erecting barriers against the 'natural' (i.e. non-biological)
dissipation of the potentials - thus establishing monopolistic
control over that resource.

For example, life coats chemically active minerals with
a layer of hydrocarbon - thus keeping the mineral surface
from contact with the ocean's water and ions. And then life
itself taps the potential in the form of a trans-membrane
potential discharged by ion transport across the membrane.
Tom Hendricks
Posted: Sat Mar 08, 2008 3:12 pm
Guest
On Mar 8, 12:18 am, "Perplexed in Peoria" <jimmene...@sbcglobal.net>
wrote:
Quote:
"Tim Tyler" <seemy...@cyberspace.org> wrote in messagenews:fqpb7m$u4o$1@darwin.ediacara.org...
Tom Hendricks wrote:

Life is that reaction to the sun heat
cycle (you call it hydrological) that is the most stable.

The sun is the energy source for most life on earth,
directly or indirectly.

The other main possibility for an energy source is
geothermal energy - mosly resudual energy from the
earth's formation - which fuels most of the rest
of life on earth via subterranean vents.

Some OOL enthusiasts do think geothermal energy was
important at the origin - but IMO, the idea doesn't
fit in terribly well with the other clues we have.

No one (except maybe Antonie Muller) thinks that it is
the 'thermal' part of geothermal that supplies the energy.
Instead the hypothesis is the proximate cause of the
energy is chemical deviations from equilibrium.  Of course,
the ultimate cause of these deviations (and the source of the
continuing replenishment of the deviations) is geothermal,
but the causation is very indirect.

As to why we have life - and not, say only wind
and rain, dissipating energy gradients on earth,
IMO, that has to do with how benign the environment is:

If life can arise and persist at all, it tends to
spread into every nook and cranny, eventually feeding
off every energy gradient it can find - putting up
hydro-electric dams to catch the rain and turbines to
catch the wind - and so on.  If not, we have a
situation like the one on Venus: just wind and rain.

In the Wachtershauser theory, the analogy of the
hydro-electric dam is particularly appropriate.  W_
thinks that the relevant chemical potentials might well
dissipate on their own if life didn't get involved in
erecting barriers against the 'natural' (i.e. non-biological)
dissipation of the potentials - thus establishing monopolistic
control over that resource.

For example, life coats chemically active minerals with
a layer of hydrocarbon - thus keeping the mineral surface
from contact with the ocean's water and ions.  And then life
itself taps the potential in the form of a  trans-membrane
potential discharged by ion transport across the membrane.

This site has a good intro to Wachtershauser's ideas
http://query.nytimes.com/gst/fullpage.html?res=9C0CE4DA143EF931A15757C0A961958260&sec=&spon=&pagewanted=all

But to me its just another pop and adapt, with metabolism being the
pop and
all the rest comes later.
Then there is the thermal vent idea with two poblems that no one seems
to
want to talk about, 1. vents sterilize, 2. no dry part for
polymerization.
How about tackling those two?

Also I note this from the article

''The theory as a whole is this overblown thing which so far has not
been shown to work,'' Dr. Miller said. ''Making acetic acid is sort of
blah to me, that's nothing.'' He doubts that surfaces really make
chemicals more stable, and as for life originating in geothermal
surroundings, he said, ''the high temperature origin of life is out of
the question.''

Comment?
Tim Tyler
Posted: Sat Mar 08, 2008 3:12 pm
Guest
Perplexed in Peoria wrote:
Quote:
"Tim Tyler" <seemysig@cyberspace.org> wrote in message news:fqpb7m$u4o$1@darwin.ediacara.org...

The other main possibility for an energy source is
geothermal energy - mosly resudual energy from the
earth's formation - which fuels most of the rest
of life on earth via subterranean vents.

Some OOL enthusiasts do think geothermal energy was
important at the origin - but IMO, the idea doesn't
fit in terribly well with the other clues we have.

No one (except maybe Antonie Muller) thinks that it is
the 'thermal' part of geothermal that supplies the energy.
Instead the hypothesis is the proximate cause of the
energy is chemical deviations from equilibrium. Of course,
the ultimate cause of these deviations (and the source of the
continuing replenishment of the deviations) is geothermal,
but the causation is very indirect.

I understand all this - but I'm sure you can also understand
how I still think the other clues we have nontheless point
elsewhere for the origin of the first organisms.

The last thing the first organisms would have needed is a
whole bunch of sticky, reactive molecules to gum up their
works.

Molecular self-assembly without errors depends on
the reactions involved being easily reversibile - so any
mistakes can be easily undone.

That's not what you are likely to get around a black smoker.
Instead, what you will get are tars.

Having said all that, I myself /do/ invoke geothermal energy here:

http://originoflife.net/location/

.....though it plays a negligible role as the source of the
organisms' energy.
--
__________
|im |yler http://timtyler.org/ tim@tt1lock.org Remove lock to reply.
Tim Tyler
Posted: Sun Mar 09, 2008 12:33 pm
Guest
Tom Hendricks wrote:


[...]

Quote:
Also I note this from the article

''The theory as a whole is this overblown thing which so far has not
been shown to work,'' Dr. Miller said. ''Making acetic acid is sort of
blah to me, that's nothing.'' He doubts that surfaces really make
chemicals more stable, and as for life originating in geothermal
surroundings, he said, ''the high temperature origin of life is out of
the question.''

Miller is a soup enthusiast. Mineral surfaces were probably
important, according to a great number of researchers - not
because they produce stability, but because they filter
and constrain molecules - and then catalyse some of their
possible reactions, while inhibiting others.

Films and membranes perform some of these tasks - but
minerals can have programmable catalytic grooves,
making them the most obvious choice for early catalysts.
--
__________
|im |yler http://timtyler.org/ tim@tt1lock.org Remove lock to reply.
Tom Hendricks
Posted: Mon Mar 10, 2008 7:48 pm
Guest
On Mar 9, 5:33 pm, Tim Tyler <seemy...@cyberspace.org> wrote:
Quote:
Tom Hendricks wrote:
This site has a good intro to Wachtershauser's ideas
http://query.nytimes.com/gst/fullpage.html?res=9C0CE4DA143EF931A15757...

[...]

Also I note this from the article

''The theory as a whole is this overblown thing which so far has not
been shown to work,'' Dr. Miller said. ''Making acetic acid is sort of
blah to me, that's nothing.'' He doubts that surfaces really make
chemicals more stable, and as for life originating in geothermal
surroundings, he said, ''the high temperature origin of life is out of
the question.''

Miller is a soup enthusiast.  Mineral surfaces were probably
important, according to a great number of researchers - not
because they produce stability, but because they filter
and constrain molecules - and then catalyse some of their
possible reactions, while inhibiting others.

Tyler said,"Not because they produce stability..."You are referring to
stability in the short run.
But in the long run a little instability then leads to more stability
overall. Stable life has been here 4 billion years.

Constancy with variation. You need both parts for stability.
Constancy alone is not enough. Variation is not enough.
Constancy with variation is the best combination.
That two part formula, exactly apes the sun/heat/temp cycle -
constancy with variation.
Life is such an obvious reflection of an adaptation to the sun heat
cycle. I'm surprised others don't see it.

So if mineral surfaces were important in the OOL, it is because
ultimately they helped produce
stability in a chemical system, which we call life.



Quote:
Films and membranes perform some of these tasks - but
minerals can have programmable catalytic grooves,
making them the most obvious choice for early catalysts.
--
__________
  |im |yler  http://timtyler.org/ t...@tt1lock.org  Remove lock to reply.
Tim Tyler
Posted: Tue Mar 11, 2008 7:24 am
Guest
Entertained by my own EIMC wrote:
Quote:
Tim Tyler wrote:

Films and membranes perform some of these tasks - but
minerals can have programmable catalytic grooves,

Should that not have been written with the word "different" (or, at a
pinch, "programming") rather than ..."programmable"...?!?

No: I /really/ meant "programmable". That the grooves are configurable
and adaptive is a basic part of the clay theory - e.g. see:

http://originoflife.net/
--
__________
|im |yler http://timtyler.org/ tim@tt1lock.org Remove lock to reply.
 
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